COVID-19 epidemiological studies

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Changing COVID-19 vaccine eligibility could reshape disease burden for all
medRxiv · 21 Oct 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.04.27.26351870
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Relapse and delay-induced dynamics in human-to-human Nipah virus transmission: a mathematical modeling study
medRxiv · 20 Oct 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.03.02.26347485
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Exploratory network-based modelling of Bundibugyo Ebola virus disease importation and spread in Uganda using Displacement Tracking Matrix flow data
medRxiv · 19 Oct 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.06.22.26356210
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Large-scale assessment of socioeconomic, demographic and health system structures with US county excess mortality, 2020-2024
medRxiv · 11 Oct 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.07.04.26357291
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Exposure Records Preserved by Two Users of Japan's COVID-19 Contact-Confirming Application During the Seventh Wave: A Descriptive Study
medRxiv · 11 Oct 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.05.06.26352506
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PRE-CISE: A PRE-calibration Coverage, Identifiability, and SEnsitivity analysis workflow to streamline model calibration
medRxiv · 10 Oct 2026 · Preprint
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A schedule-driven importation risk framework for mass gathering events: FIFA World Cup 2026
medRxiv · 9 Oct 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.06.03.26354828
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Epidemiological modeling in the age of artificial intelligence.
Nature Computational Science · 9 Oct 2026 · Journal Article
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https://jclub.com.au/a/42855544
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Simpler is not always better: Phylodynamic misspecification and deep-learning corrections
medRxiv · 6 Oct 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.05.07.26352661
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How information source and scale shape pandemic behavior change
medRxiv · 5 Oct 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.03.09.26347630
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A generalized lineage nomenclature for viral genomic epidemiology.
Nature Microbiology · 30 Sept 2026 · Journal Article
A generalized lineage nomenclature framework for viral genomic epidemiology designates 21 chikungunya virus lineages across 8 founding lineages.
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https://jclub.com.au/a/42816583
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Global Excess Maternal Mortality During the COVID-19 Pandemic: Country-Level Counterfactual Estimates and Associated Factors
medRxiv · 28 Sept 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.06.30.26356947
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A within-host-informed event-time framework linking epidemiological delay distributions
medRxiv · 26 Sept 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.09.21.26363521
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Evaluation of Deep Learning Based Early Warning Indicators of Epidemic Outbreaks
medRxiv · 26 Sept 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.09.22.26363696
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Spatial clustering of undervaccination amplifies local measles transmission but limits geographic spread: South Carolina, 2025-2026
medRxiv · 26 Sept 2026 · Preprint
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Rethinking seasonal COVID-19 vaccination in the endemic era: summer timing, eligibility, and frequency in the United States
medRxiv · 25 Sept 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.09.23.26363810
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Demographic changes and behavioural responses shape vulnerability to infectious disease outbreaks
bioRxiv · 23 Sept 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.05.11.724461
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Evidence for patterns of colonization risk in the nationwide hospitalized patient network in France
medRxiv · 23 Sept 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.09.17.26363228
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Scalable near-real-time Bayesian phylogenetics for outbreaks with Delphy.
Nature · 16 Sept 2026 · Journal Article
Delphy achieves 100,000-sequence Bayesian phylogenetic analysis within a day, offering 100 to 1000-fold speed improvements over traditional methods for outbreak datasets.
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A novel fever prevalence indicator for early warning of acute respiratory infections using wastewater-based epidemiology and machine learning.
Environmental research · 15 Sept 2026 · Journal Article
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https://jclub.com.au/a/42476399
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Integrating vaccination with short-term behavioral guidance enables mpox outbreak control
medRxiv · 15 Sept 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.05.26.26354088
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Pneumococcal population structure influences the effects of air pollution on invasive disease risk in South Africa.
Nature Microbiology · 14 Sept 2026 · Journal Article
Pneumococcal population structure determines how air pollution influences invasive disease risk, with specific lineages and serotypes showing immediate effects.
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https://jclub.com.au/a/42736433
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Modelling air pollution impacts on infectious disease.
Nature Microbiology · 14 Sept 2026 · Journal Article
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Meteorological Drivers of Influenza A and B Positivity in a Subtropical Chinese City: A Six-Year Surveillance Study Integrating Distributed Lag Non-Linear Models and Deep Learning
medRxiv · 3 Sept 2026 · Preprint
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https://jclub.com.au/a/10.1101/2025.07.13.25331478
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County, district and community-level measles transmission in the United States in 2013-2025.
Nature Medicine · 1 Sept 2026 · Journal Article
School-level measles transmission potential in the US became supercritical in 2022-2023, with vaccination susceptibility doubling to 10%, surpassing epidemic thresholds unnoticed by current surveillance.
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Quantifying the drivers of protective behaviours in epidemics: Mask wearing during COVID-19
medRxiv · 31 Aug 2026 · Preprint
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https://jclub.com.au/a/10.1101/2025.11.26.25341041
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Towards a participatory European social contact observatory
medRxiv · 27 Aug 2026 · Preprint
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https://jclub.com.au/a/10.1101/2025.11.17.25338859
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Tracking West Nile virus dynamics using viral loads from trapped mosquitoes
bioRxiv · 26 Aug 2026 · Preprint
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https://jclub.com.au/a/10.1101/2025.07.02.662782
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